miRBase entry: dan-mir-306

Stem-loop dan-mir-306

Accession

MI0008984

Description

Drosophila ananassae dan-mir-306 precursor miRNA

Gene family

MIPF0000313; mir-306

Sequence

guccacuugguagcUCAGGUACUUAGUGACUCUCAAugcauuugacauuuugggagccacuuugugccugggccaucagugcgac
(((((((.(((.((((((((((..((((.(((((((.............))))))).))))..)))))))))).))))))).)))

Structure

   -    u   a          UU    A       ugcau 
guc cacu ggu gcUCAGGUAC  AGUG CUCUCAA     u
||| |||| ||| ||||||||||  |||| |||||||     u
cag guga cua cggguccgug  ucac gaggguu     g
   c    -   c          uu    c       uuaca

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scaffold_12916: 15864863-15864947 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from dan-mir-306

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dan-miR-306

Accession	MIMAT0008450
Description	Drosophila ananassae dan-miR-306 mature miRNA
Sequence	15 - UCAGGUACUUAGUGACUCUCAA - 36
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218