miRBase entry: dan-mir-33

Stem-loop dan-mir-33


Accession
MI0008998
Description
Drosophila ananassae dan-mir-33 precursor miRNA
Gene family
MIPF0000070; mir-33


Sequence

cggagaugucacgcAGGUGCAUUGUAGUCGCAUUGucugucccacuugcuccaggcaauacaacugcagugcaagcucugugcauuucac
..((((((.((((.((.(((((((((((.(.((((((((............)))))))).).)))))))))))..)).))))))))))..

Structure
cg      u    c  -G           C C        uccca 
  gagaug cacg AG  UGCAUUGUAGU G AUUGucug     c
  |||||| |||| ||  ||||||||||| | ||||||||      
  cuuuac gugu uc  acgugacguca c uaacggac     u
ca      -    c  ga           a a        cucgu 


Annotation confidence Not enough data
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Genome context
scaffold_13337: 19456798-19456887 [-]

Database links

Mature dan-miR-33

Accession MIMAT0008461
Description Drosophila ananassae dan-miR-33 mature miRNA
Sequence 15 - AGGUGCAUUGUAGUCGCAUUG - 35
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218