miRBase entry: dan-mir-305

Stem-loop dan-mir-305


Accession
MI0009001
Description
Drosophila ananassae dan-mir-305 precursor miRNA
Gene family
MIPF0000158; mir-305


Sequence

caugucuAUUGUACUUCAUCAGGUGCUCUGguguccaccguaacccggcacauguugaaguacacucaauaug
(((((....(((((((((.((.(((((..(((..(....)..))).))))).)).)))))))))....)))))

Structure
     cuAU         U  G     CU   gu c 
caugu    UGUACUUCA CA GUGCU  Ggu  c a
|||||    ||||||||| || |||||  |||  |  
guaua    acaugaagu gu cacgg  cca  g c
     acuc         u  a     -c   au c 


Annotation confidence Not enough data
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Genome context
scaffold_12916: 15334164-15334236 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dan-mir-305
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dan-miR-305

Accession MIMAT0008464
Description Drosophila ananassae dan-miR-305 mature miRNA
Sequence 8 - AUUGUACUUCAUCAGGUGCUCUG - 30
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218