miRBase entry: dan-mir-11

Stem-loop dan-mir-11


Accession
MI0009009
Description
Drosophila ananassae dan-mir-11 precursor miRNA
Gene family
MIPF0000252; mir-11


Sequence

gcacuugccaagaacucucucugugacuuguguccuuuuuuucgaaacucaCAUCACAGUCUGAGUUCUUGCugagagc
((.((((.(((((((((...((((((..((((...((((....))))..))))))))))...))))))))).)))).))

Structure
  a    c         ucu      cu    ucc    u 
gc cuug caagaacuc   cuguga  ugug   uuuu u
|| |||| |||||||||   ||||||  ||||   ||||  
cg gagu GUUCUUGAG   GACACU  ACac   aaag u
  a    C         UCU      --    -uc    c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_13340: 5675686-5675764 [+]

Database links

Mature dan-miR-11

Accession MIMAT0008472
Description Drosophila ananassae dan-miR-11 mature miRNA
Sequence 52 - CAUCACAGUCUGAGUUCUUGC - 72
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218