miRBase entry: der-mir-31b

Stem-loop der-mir-31b


Accession
MI0009020
Description
Drosophila erecta der-mir-31b precursor miRNA
Gene family
MIPF0000064; mir-31


Sequence

caaauaaugaauuUGGCAAGAUGUCGGAAUAGCUGagagcacagcggaucgagccucuuaucguccgaaaaaaugugaauauuuuugaaaagcggcuaugccucaucuagucaauugcauuacuuug
(((((((((...(((((.(((((..((.(((((((.........((((.(((........))))))).(((((((....)))))))......))))))).)).))))).)))))...))))).))))

Structure
    -     aau     A     UC  A       ----------------agagcacag    u   gcc 
caaa uaaug   uUGGC AGAUG  GG AUAGCUG                         cgga cga   u
|||| |||||   ||||| |||||  || |||||||                         |||| |||    
guuu auuac   aacug ucuac  cc uaucggc                         gccu gcu   c
    c     guu     a     -u  g       gaaaaguuuuuauaaguguaaaaaa    -   auu 


Annotation confidence Not enough data
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Genome context
scaffold_4690: 6225310-6225436 [+]

Database links

Mature der-miR-31b

Accession MIMAT0008481
Description Drosophila erecta der-miR-31b mature miRNA
Sequence 14 - UGGCAAGAUGUCGGAAUAGCUG - 35
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218