miRBase entry: der-mir-286

Stem-loop der-mir-286


Accession
MI0009030
Description
Drosophila erecta der-mir-286 precursor miRNA
Gene family
MIPF0000225; mir-286


Sequence

uuaaaauugaauggcgaaugucgguauggucucuuuuucaaagaagguuucgaucgagcgaagUGACUAGACCGAACACUCGUGCUauaauuuuaaaa
(((((((((....((((.(((((((.(((((.(((((((...(((...)))....))).)))).))))).)))).))).))))....)))))))))..

Structure
--         aaug    a   -    a     u    -   -aaa   g 
  uuaaaauug    gcga ugu cggu ugguc cuuu uuc    gaa  
  |||||||||    |||| ||| |||| ||||| |||| |||    ||| g
  aauuuuaau    UGCU ACA GCCA AUCAG gaag gag    cuu  
aa         aUCG    C   A    G     U    c   cuag   u 


Annotation confidence Not enough data
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Genome context
scaffold_4845: 9749180-9749277 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from der-mir-286
Name Accession Chromosome Start End Strand Confidence




Database links

Mature der-miR-286

Accession MIMAT0008491
Description Drosophila erecta der-miR-286 mature miRNA
Sequence 64 - UGACUAGACCGAACACUCGUGCU - 86
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218