miRBase entry: der-mir-279

Stem-loop der-mir-279


Accession
MI0009054
Description
Drosophila erecta der-mir-279 precursor miRNA
Gene family
MIPF0000184; mir-279


Sequence

auacuacuguuuuuaguggguggggguccaguguuucacauugauuuucuuaguauuugUGACUAGAUCCACACUCAUUAAuaacgguaguuc
..(((((((((.((((((((((.(((((.((....(((((...(((.....)))...))))))).))))).)))))))))).)))))))))..

Structure
au         u          g     c  uguu     uug   u 
  acuacuguu uuagugggug ggguc ag    ucaca   auu u
  ||||||||| |||||||||| ||||| ||    |||||   ||| c
  ugauggcaa AAUUACUCAC CCUAG UC    AGUgu   uga u
cu         u          A     A  ----     uua   u 


Annotation confidence Not enough data
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Genome context
scaffold_4820: 2989065-2989157 [-]

Database links

Mature der-miR-279

Accession MIMAT0008515
Description Drosophila erecta der-miR-279 mature miRNA
Sequence 60 - UGACUAGAUCCACACUCAUUAA - 81
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218