miRBase entry: der-mir-277

Stem-loop der-mir-277


Accession
MI0009056
Description
Drosophila erecta der-mir-277 precursor miRNA
Gene family
MIPF0000156; mir-277


Sequence

uugaagguuuugggcugcgugucaggagugcauuugcacugaaacuaucugaagcaugUAAAUGCACUAUCUGGUACGACAuuccagaacguacaauc
(((.(.((((((((.(((((((((((((((((((((((.((...(.....)...)))))))))))))).))))))))).)).)))))))).).)))..

Structure
--   a g        c  -         -            c  aaa u 
  uug a guuuuggg ug cgugucagg agugcauuugca ug   c a
  ||| | |||||||| || ||||||||| |||||||||||| ||   | u
  aac u caagaccu AC GCAUGGUCU UCACGUAAAUgu ac   g c
cu   a g        u  A         A            -  gaa u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_4770: 15674296-15674393 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from der-mir-277
Name Accession Chromosome Start End Strand Confidence




Database links

Mature der-miR-277

Accession MIMAT0008517
Description Drosophila erecta der-miR-277 mature miRNA
Sequence 59 - UAAAUGCACUAUCUGGUACGACA - 81
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218