miRBase entry: der-mir-4

Stem-loop der-mir-4

Accession

MI0009073

Description

Drosophila erecta der-mir-4 precursor miRNA

Gene family

MIPF0000305; mir-4

Sequence

uugcaauuaguuucuuuggucguccagccuuaggugacuuuucugaucAUAAAGCUAGACAACCAUUGAaguucguugugg
..(((((.((((((..((((.(((.(((.((((((.(......).))).))).))).))).))))..)))))).)))))..

Structure

uu     u      uu    c   c   c   -   g cu 
  gcaau aguuuc  uggu guc agc uua ggu a  u
  ||||| ||||||  |||| ||| ||| ||| ||| |   
  uguug uugaAG  ACCA CAG UCG AAU cua u  u
gg     c      UU    A   A   A   A   g cu

Annotation confidence Not enough data

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Genome context

scaffold_4845: 9749045-9749125 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from der-mir-4

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature der-miR-4

Accession	MIMAT0008532
Description	Drosophila erecta der-miR-4 mature miRNA
Sequence	49 - AUAAAGCUAGACAACCAUUGA - 69
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218