miRBase entry: der-mir-124

Stem-loop der-mir-124


Accession
MI0009088
Description
Drosophila erecta der-mir-124 precursor miRNA
Gene family
MIPF0000021; mir-124


Sequence

uacguuuuucuccugguauccacuguaggccuauauguauuuccaccaUAAGGCACGCGGUGAAUGCCAAGagcgaacgca
..(((((..(((.((((((.((((((..((((.((((.........))))))))..)))))).)))))).))).)))))..

Structure
ua     uu   c      c      ag    a    uau 
  cguuu  cuc ugguau cacugu  gccu uaug   u
  |||||  ||| |||||| ||||||  |||| ||||   u
  gcaag  gaG ACCGUA GUGGCG  CGGA AUac   c
ac     -c   A      A      CA    -    cac 


Annotation confidence Not enough data
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Genome context
scaffold_4845: 6683979-6684059 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from der-mir-124
Name Accession Chromosome Start End Strand Confidence




Database links

Mature der-miR-124

Accession MIMAT0008547
Description Drosophila erecta der-miR-124 mature miRNA
Sequence 49 - UAAGGCACGCGGUGAAUGCCAAG - 71
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218