miRBase entry: der-mir-304

Stem-loop der-mir-304


Accession
MI0009090
Description
Drosophila erecta der-mir-304 precursor miRNA
Gene family
MIPF0000308; mir-304


Sequence

gcagcauugaaUAAUCUCAAUUUGUAAAUGUGAGcgguuugagccauuugacgcacucacuuugcaauuggagauugcucgagacugc
((((..((((.(((((((...(((((((.(((((.((((.((....)).))).).))))))))))))...))))))).))))..))))

Structure
    ca    a       AAU       U     c -   u  g 
gcag  uuga UAAUCUC   UUGUAAA GUGAG g guu ga c
||||  |||| |||||||   ||||||| ||||| | ||| ||  
cguc  agcu guuagag   aacguuu cacuc c cag uu c
    ag    c       guu       -     a g   u  a 


Annotation confidence Not enough data
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Genome context
scaffold_4690: 11631473-11631560 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from der-mir-304
Name Accession Chromosome Start End Strand Confidence




Database links

Mature der-miR-304

Accession MIMAT0008548
Description Drosophila erecta der-miR-304 mature miRNA
Sequence 12 - UAAUCUCAAUUUGUAAAUGUGAG - 34
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218