miRBase entry: dgr-mir-12

Stem-loop dgr-mir-12


Accession
MI0009103
Description
Drosophila grimshawi dgr-mir-12 precursor miRNA
Gene family
MIPF0000181; mir-12


Sequence

uacgguUGAGUAUUACAUCAGGUACUGGUgugccauuuaaccaacaaccaguacuuaugucauacuacgccgug
((((((..(((((.((((.((((((((((((............)).)))))))))))))).)))))..))))))

Structure
      UG     U    C          -  gccau 
uacggu  AGUAU ACAU AGGUACUGGU gu     u
||||||  ||||| |||| |||||||||| ||      
gugccg  ucaua ugua uucaugacca ca     u
      ca     c    -          a  accaa 


Annotation confidence Not enough data
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Genome context
scaffold_14853: 6951722-6951795 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from dgr-mir-12
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dgr-miR-12

Accession MIMAT0008560
Description Drosophila grimshawi dgr-miR-12 mature miRNA
Sequence 7 - UGAGUAUUACAUCAGGUACUGGU - 29
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218