miRBase entry: dgr-mir-92a

Stem-loop dgr-mir-92a


Accession
MI0009113
Description
Drosophila grimshawi dgr-mir-92a precursor miRNA
Gene family
MIPF0000013; mir-25


Sequence

auaaauugcuugcaggacgggaaggugucaacguuuugcauuuugaaucaaaCAUUGCACUUGUCCCGGCCUAUgagcgguuugugc
((((((((((((.(((.((((((((((.(((.((((.............)))).)))))))).))))).))).))))))))))))..

Structure
--            c   a     -     u   c    ugcau 
  auaaauugcuug agg cggga aggug caa guuu     u
  |||||||||||| ||| ||||| ||||| ||| ||||     u
  uguuuggcgagU UCC GCCCU UUCAC GUU Caaa     u
cg            A   G     G     -   A    cuaag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_14906: 3023263-3023349 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dgr-mir-92a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dgr-miR-92a

Accession MIMAT0008571
Description Drosophila grimshawi dgr-miR-92a mature miRNA
Sequence 53 - CAUUGCACUUGUCCCGGCCUAU - 74
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218