miRBase entry: dmo-mir-92a

Stem-loop dmo-mir-92a


Accession
MI0009187
Description
Drosophila mojavensis dmo-mir-92a precursor miRNA
Gene family
MIPF0000013; mir-25


Sequence

ucauaaauugcuugcaggacgggaaggugucaacguuuuaccuuuugauucaaaCAUUGCACUUGUCCCGGCCUAUgagcgguuuaucu
..((((((((((((.(((.((((((((((.(((.((((.............)))).)))))))).))))).))).))))))))))))..

Structure
uc            c   a     -     u   c    uaccu 
  auaaauugcuug agg cggga aggug caa guuu     u
  |||||||||||| ||| ||||| ||||| ||| ||||     u
  uauuuggcgagU UCC GCCCU UUCAC GUU Caaa     u
uc            A   G     G     -   A    cuuag 


Annotation confidence Not enough data
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Genome context
scaffold_6540: 25734566-25734654 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dmo-mir-92a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dmo-miR-92a

Accession MIMAT0008633
Description Drosophila mojavensis dmo-miR-92a mature miRNA
Sequence 55 - CAUUGCACUUGUCCCGGCCUAU - 76
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218