miRBase entry: dmo-mir-281-2

Stem-loop dmo-mir-281-2

Accession

MI0009200

Description

Drosophila mojavensis dmo-mir-281-2 precursor miRNA

Gene family

MIPF0000087; mir-46

Sequence

cgaauagcgaaaugAAGAGAGCUAUCCGUCGACAGUcaaguuauauacauauuuuaauacUGUCAUGGAAUUGCUCUCUUUGUauaauauucg
((((((.....(((((((((((..(((((.((((((...((((...........)))))))))))))))...)))))))))))....))))))

Structure

      gcgaa           -UA     C      caa    uaua 
cgaaua     augAAGAGAGC   UCCGU GACAGU   guua    c
||||||     |||||||||||   ||||| ||||||   ||||    a
gcuuau     UGUUUCUCUCG   AGGUA CUGUca   uaau    u
      -aaua           UUA     -      ---    uuua

Annotation confidence Not enough data

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Genome context

scaffold_6496: 6376069-6376161 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dmo-mir-281-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dmo-miR-281-3p

Accession	MIMAT0008642
Description	Drosophila mojavensis dmo-miR-281-3p mature miRNA
Sequence	61 - UGUCAUGGAAUUGCUCUCUUUGU - 83
Evidence	not_experimental

Mature dmo-miR-281-2-5p

Accession	MIMAT0009185
Description	Drosophila mojavensis dmo-miR-281-2-5p mature miRNA
Sequence	15 - AAGAGAGCUAUCCGUCGACAGU - 36
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218