miRBase entry: dmo-mir-306

Stem-loop dmo-mir-306

Accession

MI0009202

Description

Drosophila mojavensis dmo-mir-306 precursor miRNA

Gene family

MIPF0000313; mir-306

Sequence

gcUCAGGUACUUAGUGACUCUCAAucacauauugcuuugcauacuuuGAGGGUCGCUCUGUGCCUGUGCcg
((.(((((((..((((((((((((........(((...)))....))))))))))))..))))))).))..

Structure

--  U       UU            ucacauau   u 
  gc CAGGUAC  AGUGACUCUCAA        ugc  
  || |||||||  ||||||||||||        ||| u
  CG GUCCGUG  UCGCUGGGAGuu        acg  
gc  U       UC            ----ucau   u

Annotation confidence Not enough data

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Genome context

scaffold_6500: 7201957-7202027 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from dmo-mir-306

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dmo-miR-306-5p

Accession	MIMAT0008648
Description	Drosophila mojavensis dmo-miR-306-5p mature miRNA
Sequence	3 - UCAGGUACUUAGUGACUCUCAA - 24
Evidence	not_experimental

Mature dmo-miR-306-3p

Accession	MIMAT0008649
Description	Drosophila mojavensis dmo-miR-306-3p mature miRNA
Sequence	48 - GAGGGUCGCUCUGUGCCUGUGC - 69
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218