miRBase entry: dmo-mir-92b

Stem-loop dmo-mir-92b


Accession
MI0009211
Description
Drosophila mojavensis dmo-mir-92b precursor miRNA
Gene family
MIPF0000013; mir-25


Sequence

aacgucaccugauguaggucgugccuggugcuuauuuguuguuaugcgaaaauacaAAUUGCACUAGUCCCGGCCUGCagugagugucgca
..((.(((....(((((((((.(.(((((((..((((((..((......))..)))))).))))))).).)))))))))....))).))..

Structure
aa  u   cuga         u c       uu      ug  au 
  cg cac    uguaggucg g cuggugc  auuugu  uu  g
  || |||    ||||||||| | |||||||  ||||||  ||   
  gc gug    aCGUCCGGC C GAUCACG  UAAaca  aa  c
ac  u   agug         C U       -U      ua  ag 


Annotation confidence Not enough data
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Genome context
scaffold_6540: 25731653-25731743 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dmo-mir-92b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dmo-miR-92b

Accession MIMAT0008658
Description Drosophila mojavensis dmo-miR-92b mature miRNA
Sequence 57 - AAUUGCACUAGUCCCGGCCUGC - 78
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218