miRBase entry: dmo-mir-317

Stem-loop dmo-mir-317


Accession
MI0009224
Description
Drosophila mojavensis dmo-mir-317 precursor miRNA
Gene family
MIPF0000144; mir-317


Sequence

ugcaauugccgcugggauacacccugugcucgcuuugaguuuauguugcaagUGAACACAGCUGGUGGUAUCCAGAggccguugac
..((((.(((.(((((...(((((((((.((((((..((......))..)))))).)))))..))))...))))).))).))))..

Structure
ug    u   g     aua    --     c      ug  uu 
  caau gcc cuggg   cacc  cugug ucgcuu  ag  u
  |||| ||| |||||   ||||  ||||| ||||||  ||   
  guug cgg GACCU   GUGG  GACAC AGUgaa  uu  a
ca    c   A     AUG    UC     A      cg  gu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_6540: 11898863-11898948 [-]

Database links

Mature dmo-miR-317

Accession MIMAT0008671
Description Drosophila mojavensis dmo-miR-317 mature miRNA
Sequence 53 - UGAACACAGCUGGUGGUAUCCAGA - 76
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218