miRBase entry: dmo-mir-6-2

Stem-loop dmo-mir-6-2


Accession
MI0009232
Description
Drosophila mojavensis dmo-mir-6-2 precursor miRNA
Gene family
MIPF0000119; mir-6


Sequence

uaaccgcagggaacugcugcugcugauauacuauauguauuugucaguacucuaUAUCACAGUGGCUGUUCUUUUUgguug
((((((.(((((((.(((((((.(((((((......(((((....)))))..)))))))))))))).))))))).))))))

Structure
      c       u       c       cuauau     u 
uaaccg agggaac gcugcug ugauaua      guauu g
|||||| ||||||| ||||||| |||||||      |||||  
guuggU UUUCUUG CGGUGAC ACUAUau      cauga u
      U       U       -       ----cu     c 


Annotation confidence Not enough data
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Genome context
scaffold_6496: 20936137-20936217 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from dmo-mir-6-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dmo-miR-6

Accession MIMAT0008635
Description Drosophila mojavensis dmo-miR-6 mature miRNA
Sequence 55 - UAUCACAGUGGCUGUUCUUUUU - 76
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218