miRBase entry: dmo-let-7

Stem-loop dmo-let-7

Accession

MI0009239

Description

Drosophila mojavensis dmo-let-7 precursor miRNA

Gene family

MIPF0000002; let-7

Sequence

ucuggcaaauUGAGGUAGUAGGUUGUAUAGUaguacuuauagaccauacuauacagcgugcuagcuuucuuugcuuga
((.((((((..(((.(((((.(((((((((((..............))))))))))).))))).)))..)))))).))

Structure

  u      uU   G     G           guacuu 
uc ggcaaa  GAG UAGUA GUUGUAUAGUa      a
|| ||||||  ||| ||||| |||||||||||       
ag ucguuu  uuc aucgu cgacauaucau      u
  u      cu   g     g           accaga

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scaffold_6500: 6184580-6184657 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from dmo-let-7

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dmo-let-7

Accession	MIMAT0008686
Description	Drosophila mojavensis dmo-let-7 mature miRNA
Sequence	11 - UGAGGUAGUAGGUUGUAUAGU - 31
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218