miRBase entry: dpe-mir-277

Stem-loop dpe-mir-277

Accession

MI0009256

Description

Drosophila persimilis dpe-mir-277 precursor miRNA

Gene family

MIPF0000156; mir-277

Sequence

uugaagguuuuggguugcgugucaggagugcauuugcacugaaacauucugaagcuugUAAAUGCACUAUCUGGUACGACAuuccagaacguacaauc
(((.(.((((((((.(((((((((((((((((((((((((............))..)))))))))))).))))))))).)).)))))))).).)))..

Structure

--   a g        u  -         -            --  gaaac 
  uug a guuuuggg ug cgugucagg agugcauuugca  cu     a
  ||| | |||||||| || ||||||||| ||||||||||||  ||      
  aac u caagaccu AC GCAUGGUCU UCACGUAAAUgu  ga     u
cu   a g        u  A         A            uc  agucu

Annotation confidence Not enough data

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Genome context

scaffold_19: 726038-726135 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from dpe-mir-277

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dpe-miR-277

Accession	MIMAT0008702
Description	Drosophila persimilis dpe-miR-277 mature miRNA
Sequence	59 - UAAAUGCACUAUCUGGUACGACA - 81
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218