miRBase entry: dpe-mir-279

Stem-loop dpe-mir-279


Accession
MI0009288
Description
Drosophila persimilis dpe-mir-279 precursor miRNA
Gene family
MIPF0000184; mir-279


Sequence

auacuacuguuuuuagugagugaggguccaguguuucacauugauuuucuuaguauuugUGACUAGAUCCACACUCAUUAAuaacgguaguuc
..(((((((((.((((((((((.(((((.((....(((((...(((.....)))...))))))).))))).)))))))))).)))))))))..

Structure
au         u          a     c  uguu     uug   u 
  acuacuguu uuagugagug ggguc ag    ucaca   auu u
  ||||||||| |||||||||| ||||| ||    |||||   ||| c
  ugauggcaa AAUUACUCAC CCUAG UC    AGUgu   uga u
cu         u          A     A  ----     uua   u 


Annotation confidence Not enough data
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Genome context
scaffold_7: 2045319-2045411 [+]

Database links

Mature dpe-miR-279

Accession MIMAT0008734
Description Drosophila persimilis dpe-miR-279 mature miRNA
Sequence 60 - UGACUAGAUCCACACUCAUUAA - 81
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218