miRBase entry: dpe-mir-11

Stem-loop dpe-mir-11


Accession
MI0009292
Description
Drosophila persimilis dpe-mir-11 precursor miRNA
Gene family
MIPF0000252; mir-11


Sequence

cucuugucaagaacuuauucugugaccugcgugacauuuagccaCAUCACAGUCUGAGUUCUUGCugagcg
(((..(.((((((((((..((((((..((.((........))))..))))))..))))))))))).)))..

Structure
--   uu u          uu      cc  c  gac 
  cuc  g caagaacuua  cuguga  ug gu   a
  |||  | ||||||||||  ||||||  || ||    
  gag  C GUUCUUGAGU  GACACU  ac cg   u
gc   -u -          CU      AC  -  auu 


Annotation confidence Not enough data
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Genome context
scaffold_3: 6634126-6634196 [-]

Database links

Mature dpe-miR-11

Accession MIMAT0008737
Description Drosophila persimilis dpe-miR-11 mature miRNA
Sequence 45 - CAUCACAGUCUGAGUUCUUGC - 65
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218