miRBase entry: dpe-mir-92a

Stem-loop dpe-mir-92a


Accession
MI0009325
Description
Drosophila persimilis dpe-mir-92a precursor miRNA
Gene family
MIPF0000013; mir-25


Sequence

uagagauugcccguaggacgggaaggugucaacguuuuacauuuugaacaaaCAUUGCACUUGUCCCGGCCUAUgggcggcuugu
..(((.(((((((((((.((((((((((.(((.((((............)))).)))))))).))))).))))))))))))))..

Structure
ua   a           a     -     u   c    uacau 
  gag uugcccguagg cggga aggug caa guuu     u
  ||| ||||||||||| ||||| ||||| ||| ||||      
  uuc ggcgggUAUCC GCCCU UUCAC GUU Caaa     u
ug   -           G     G     -   A    caagu 


Annotation confidence Not enough data
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Genome context
scaffold_3: 6410324-6410408 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dpe-mir-92a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dpe-miR-92a

Accession MIMAT0008763
Description Drosophila persimilis dpe-miR-92a mature miRNA
Sequence 53 - CAUUGCACUUGUCCCGGCCUAU - 74
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218