miRBase entry: dse-mir-9a

Stem-loop dse-mir-9a


Accession
MI0009362
Description
Drosophila sechellia dse-mir-9a precursor miRNA
Gene family
MIPF0000014; mir-9


Sequence

gcuauguugUCUUUGGUUAUCUAGCUGUAUGAgugauaaauaacgucauaaagcuagcuuaccgaaguuaauauuagc
(((((((((.(((((((...((((((.(((((((........)).))))).))))))...))))))).))))).))))

Structure
    -     U       UAU      G     -  gau 
gcua uguug CUUUGGU   CUAGCU UAUGA gu   a
|||| ||||| |||||||   |||||| ||||| ||    
cgau auaau gaagcca   gaucga auacu ca   a
    u     u       uuc      a     g  aua 


Annotation confidence Not enough data
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Genome context
scaffold_29: 261384-261461 [+]

Database links

Mature dse-miR-9a

Accession MIMAT0008800
Description Drosophila sechellia dse-miR-9a mature miRNA
Sequence 10 - UCUUUGGUUAUCUAGCUGUAUGA - 32
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218