miRBase entry: dse-mir-279

Stem-loop dse-mir-279


Accession
MI0009370
Description
Drosophila sechellia dse-mir-279 precursor miRNA
Gene family
MIPF0000184; mir-279


Sequence

auacugcuguuuuuaguggguggggguccaguguuucacauugauuuucuuaguauuugUGACUAGAUCCACACUCAUUAAuaacgguaguuc
..(((((((((.((((((((((.(((((.((....(((((...(((.....)))...))))))).))))).)))))))))).)))))))))..

Structure
au         u          g     c  uguu     uug   u 
  acugcuguu uuagugggug ggguc ag    ucaca   auu u
  ||||||||| |||||||||| ||||| ||    |||||   ||| c
  ugauggcaa AAUUACUCAC CCUAG UC    AGUgu   uga u
cu         u          A     A  ----     uua   u 


Annotation confidence Not enough data
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Genome context
scaffold_4: 3904094-3904186 [+]

Database links

Mature dse-miR-279

Accession MIMAT0008808
Description Drosophila sechellia dse-miR-279 mature miRNA
Sequence 60 - UGACUAGAUCCACACUCAUUAA - 81
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218