miRBase entry: dse-mir-13b-2

Stem-loop dse-mir-13b-2


Accession
MI0009378
Description
Drosophila sechellia dse-mir-13b-2 precursor miRNA
Gene family
MIPF0000049; mir-2


Sequence

ucaacgcgucaaaaugacugugagcuauguggauuugacuucaUAUCACAGCCAUUUUGACGAGUuug
..(((.((((((((((.((((((..((((.((......)).)))))))))).)))))))))).)))..

Structure
uc   g          a      gc    u  au 
  aac cgucaaaaug cuguga  uaug gg  u
  ||| |||||||||| ||||||  |||| ||   
  uUG GCAGUUUUAC GACACU  AUac uc  u
gu   A          C      --    u  ag 


Annotation confidence Not enough data
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Genome context
scaffold_34: 345620-345687 [+]

Database links

Mature dse-miR-13b

Accession MIMAT0008816
Description Drosophila sechellia dse-miR-13b mature miRNA
Sequence 44 - UAUCACAGCCAUUUUGACGAGU - 65
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218