miRBase entry: dsi-mir-286

Stem-loop dsi-mir-286


Accession
MI0009424
Description
Drosophila simulans dsi-mir-286 precursor miRNA
Gene family
MIPF0000225; mir-286


Sequence

uuaaaauugaauggcgaaugucgguauggucucuuuuuccaaagaaagguuucgaucaagcgaagUGACUAGACCGAACACUCGUGCUauaauuuuaaaa
(((((((((....((((.(((((((.(((((.((((.......(((....)))........)))).))))).)))).))).))))....)))))))))..

Structure
--         aaug    a   -    a     u    -uuccaaa   a 
  uuaaaauug    gcga ugu cggu ugguc cuuu        gaa g
  |||||||||    |||| ||| |||| ||||| ||||        |||  
  aauuuuaau    UGCU ACA GCCA AUCAG gaag        cuu g
aa         aUCG    C   A    G     U    cgaacuag   u 


Annotation confidence Not enough data
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Genome context
chr2R: 14254362-14254461 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from dsi-mir-286
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dsi-miR-286

Accession MIMAT0008859
Description Drosophila simulans dsi-miR-286 mature miRNA
Sequence 66 - UGACUAGACCGAACACUCGUGCU - 88
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218