miRBase entry: dsi-mir-11

Stem-loop dsi-mir-11


Accession
MI0009430
Description
Drosophila simulans dsi-mir-11 precursor miRNA
Gene family
MIPF0000252; mir-11


Sequence

gcacuugucaagaacuuucucugugacccgcguguacuuaaaagccgCAUCACAGUCUGAGUUCUUGCugagugc
(((((((.(((((((((...((((((...(((.((........))))).))))))...))))))))).)))))))

Structure
       u         ucu      ccc   u  acu 
gcacuug caagaacuu   cuguga   gcg gu   u
||||||| |||||||||   ||||||   ||| ||    
cgugagu GUUCUUGAG   GACACU   Cgc cg   a
       C         UCU      --A   -  aaa 


Annotation confidence Not enough data
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Genome context
chr3R: 4022578-4022652 [+]

Database links

Mature dsi-miR-11

Accession MIMAT0008865
Description Drosophila simulans dsi-miR-11 mature miRNA
Sequence 48 - CAUCACAGUCUGAGUUCUUGC - 68
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218