miRBase entry: dsi-mir-33

Stem-loop dsi-mir-33


Accession
MI0009431
Description
Drosophila simulans dsi-mir-33 precursor miRNA
Gene family
MIPF0000070; mir-33

Literature search
1 open access papers mention dsi-mir-33
(1 sentences)

Sequence

cggagaugacacgaAGGUGCAUUGUAGUCGCAUUGucugucccaauugcuucaggcaauacaacuucagugcaagcucugugcauuucac
..((((((.((((.((.(((((((.(((.(.((((((((............)))))))).).))).)))))))..)).))))))))))..

Structure
cg      a    a  -G       U   C C        uccca 
  gagaug cacg AG  UGCAUUG AGU G AUUGucug     a
  |||||| |||| ||  ||||||| ||| | ||||||||      
  cuuuac gugu uc  acgugac uca c uaacggac     u
ca      -    c  ga       u   a a        uucgu 


Annotation confidence Not enough data
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Genome context
chr3L: 19083126-19083215 [+]

Database links

Mature dsi-miR-33

Accession MIMAT0008866
Description Drosophila simulans dsi-miR-33 mature miRNA
Sequence 15 - AGGUGCAUUGUAGUCGCAUUG - 35
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218