miRBase entry: dsi-mir-31a

Stem-loop dsi-mir-31a


Accession
MI0009453
Description
Drosophila simulans dsi-mir-31a precursor miRNA
Gene family
MIPF0000064; mir-31


Sequence

uccguugguaaauUGGCAAGAUGUCGGCAUAGCUGAcguugaaaagcgauuuugaagagcgcuaugcugcaucuagucaguuguucaaugga
((((((((..(((((((.(((((.(((((((((.(...((.((((....)))).))...))))))))))))))).)))))))..))))))))

Structure
        ua       A     U         U Acg  g    g 
uccguugg  aauUGGC AGAUG CGGCAUAGC G   uu aaaa c
||||||||  ||||||| ||||| ||||||||| |   || ||||  
agguaacu  uugacug ucuac gucguaucg c   aa uuuu g
        ug       a     -         - gag  g    a 


Annotation confidence Not enough data
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Genome context
chr2R: 12409857-12409948 [-]

Database links

Mature dsi-miR-31a

Accession MIMAT0008886
Description Drosophila simulans dsi-miR-31a mature miRNA
Sequence 14 - UGGCAAGAUGUCGGCAUAGCUGA - 36
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218