miRBase entry: dsi-mir-309

Stem-loop dsi-mir-309

Accession

MI0009461

Description

Drosophila simulans dsi-mir-309 precursor miRNA

Gene family

MIPF0000140; mir-3

Sequence

auuauacgacaaaccuuguucgguuuugccaauuuccaagccaGCACUGGGUAAAGUUUGUCCUAuaau
((((((.(((((((.(((((((((.(((.(.........).))).))))))))).))))))).))))))

Structure

      c       c         u   c aau 
auuaua gacaaac uuguucggu uug c   u
|||||| ||||||| ||||||||| ||| |   u
uaauAU CUGUUUG AAUGGGUCA Gac g   c
      C       A         C   c aac

Annotation confidence Not enough data

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Genome context

chr2R: 14254644-14254712 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from dsi-mir-309

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dsi-miR-309

Accession	MIMAT0008894
Description	Drosophila simulans dsi-miR-309 mature miRNA
Sequence	44 - GCACUGGGUAAAGUUUGUCCUA - 65
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218