miRBase entry: dvi-mir-282

Stem-loop dvi-mir-282


Accession
MI0009498
Description
Drosophila virilis dvi-mir-282 precursor miRNA
Gene family
MIPF0000150; mir-282


Sequence

aauuuccuuauaaaucuagcCUCUACUAGGCUUUGUCUgugcauucgauauacggucagACAUAGCCUAUGAGAGGUUAGGuguaccaagggga
..(((((((....(((((((((((..((((((.((((((.((............)))))))).))))))..))))))))))).....)))))))

Structure
aa       -auaa           AC      U      u  auucg 
  uuuccuu     aucuagcCUCU  UAGGCU UGUCUg gc     a
  |||||||     |||||||||||  |||||| |||||| ||      
  aggggaa     uGGAUUGGAGA  AUCCGA ACAgac ug     u
--       ccaug           GU      U      -  gcaua 


Annotation confidence Not enough data
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Genome context
scaffold_12758: 910711-910804 [-]

Database links

Mature dvi-miR-282-5p

Accession MIMAT0008932
Description Drosophila virilis dvi-miR-282-5p mature miRNA
Sequence 21 - CUCUACUAGGCUUUGUCU - 38
Evidence experimental
Illumina [2]

Mature dvi-miR-282-3p

Accession MIMAT0032059
Description Drosophila virilis dvi-miR-282-3p mature miRNA
Sequence 60 - ACAUAGCCUAUGAGAGGUUAGG - 81
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218

  2. PubMed ID: 24448446
    Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "RNA (2014) 20:360-372