miRBase entry: dvi-mir-315a

Stem-loop dvi-mir-315a


Accession
MI0009510
Description
Drosophila virilis dvi-mir-315a precursor miRNA
Gene family
MIPF0000141; mir-315


Sequence

cgccuauaucaUUUUGAUUGUUGCUCAGAAAGCCcugcauucaauacuuggcuuucgaguaauaaucgaaaccaaauaagcg
(((.(((....(((((((((((((((.(((((((..(.........)..))))))))))))))))))))))....))).)))

Structure
   c   auca               A       cu cau 
cgc uau    UUUUGAUUGUUGCUC GAAAGCC  g   u
||| |||    ||||||||||||||| |||||||  |   c
gcg aua    aaagcuaauaaugag cuuucgg  c   a
   a   aacc               -       uu aua 


Annotation confidence Not enough data
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Genome context
scaffold_13049: 18083590-18083671 [-]

Database links

Mature dvi-miR-315a

Accession MIMAT0008944
Description Drosophila virilis dvi-miR-315a mature miRNA
Sequence 12 - UUUUGAUUGUUGCUCAGAAAGCC - 34
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218

  2. PubMed ID: 24448446
    Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "RNA (2014) 20:360-372