miRBase entry: dwi-mir-133

Stem-loop dwi-mir-133


Accession
MI0009625
Description
Drosophila willistoni dwi-mir-133 precursor miRNA
Gene family
MIPF0000029; mir-133


Sequence

uacaacacugaauguagcugguugacaucgggucagaucuauuuauuugaagcauUUGGUCCCCUUCAACCAGCUGUagcagugguugau
..((((((((..(((((((((((((....(((((((((((..........)).)))))).)))..))))))))))))).)))).))))..

Structure
ua    -    aa             cauc   -      -  auuu 
  caac acug  uguagcugguuga    ggg ucagau cu    a
  |||| ||||  |||||||||||||    ||| |||||| ||     
  guug ugac  aUGUCGACCAACU    CCC GGUUua ga    u
ua    g    -g             --UC   U      c  aguu 


Annotation confidence Not enough data
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Genome context
scf2_1100000004521: 2027542-2027631 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dwi-mir-133
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dwi-miR-133

Accession MIMAT0009051
Description Drosophila willistoni dwi-miR-133 mature miRNA
Sequence 56 - UUGGUCCCCUUCAACCAGCUGU - 77
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218