miRBase entry: dya-mir-281-2

Stem-loop dya-mir-281-2


Accession
MI0009634
Description
Drosophila yakuba dya-mir-281-2 precursor miRNA
Gene family
MIPF0000087; mir-46


Sequence

cgaauagugaaaugAAGAGAGCUAUCCGUCGACAGUcaaguuaauaccaauuguaauacUGUCAUGGAAUUGCUCUCUUUGUauaauauucg
((((((.....(((((((((((..(((((.((((((.....((((....))))....)))))))))))...)))))))))))....))))))

Structure
      gugaa           -UA     C      caagu    a 
cgaaua     augAAGAGAGC   UCCGU GACAGU     uaau c
||||||     |||||||||||   ||||| ||||||     ||||  
gcuuau     UGUUUCUCUCG   AGGUA CUGUca     guua c
      -aaua           UUA     -      -uaau    a 


Annotation confidence Not enough data
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Genome context
chr2R: 8893554-8893645 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dya-mir-281-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dya-miR-281-2-5p

Accession MIMAT0009190
Description Drosophila yakuba dya-miR-281-2-5p mature miRNA
Sequence 15 - AAGAGAGCUAUCCGUCGACAGU - 36
Evidence not_experimental

Mature dya-miR-281-3p

Accession MIMAT0009061
Description Drosophila yakuba dya-miR-281-3p mature miRNA
Sequence 60 - UGUCAUGGAAUUGCUCUCUUUGU - 82
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218