miRBase entry: dya-mir-34

Stem-loop dya-mir-34


Accession
MI0009653
Description
Drosophila yakuba dya-mir-34 precursor miRNA
Gene family
MIPF0000039; mir-34


Sequence

uggcuaugcgcuuUGGCAGUGUGGUUAGCUGGUUGuguagccaauuauugccguugacaauucacagccacuaucuucacugccgccgcgacaagc
..(((.(((((..((((((((.((.(((.((((((((..(.((((.......)))).)....))))))))))).)).))))))))..))).)))))

Structure
ug   a  -   uu        U  U   C        --ua c    ua 
  gcu ug cgc  UGGCAGUG GG UAG UGGUUGug    g caau  u
  ||| || |||  |||||||| || ||| ||||||||    | ||||  u
  cga ac gcg  gccgucac uc auc accgacac    c guug  g
--   -  a   cc        u  u   -        uuaa a    cc 


Annotation confidence Not enough data
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Genome context
chr3R: 9974472-9974567 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dya-mir-34
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dya-miR-34

Accession MIMAT0009081
Description Drosophila yakuba dya-miR-34 mature miRNA
Sequence 14 - UGGCAGUGUGGUUAGCUGGUUG - 35
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218