miRBase entry: dya-mir-2a-1

Stem-loop dya-mir-2a-1


Accession
MI0009690
Description
Drosophila yakuba dya-mir-2a-1 precursor miRNA
Gene family
MIPF0000049; mir-2


Sequence

gcugggcucucaaagugguugugaaaugcauuuccgcuuugcgcggcaUAUCACAGCCAGCUUUGAUGAGCuuagc
((((((((((((((((((((((((.((((.....(((.....))))))).))))))))).)))))).)))))))))

Structure
         -      -         a    auuuc   u 
gcugggcuc ucaaag ugguuguga augc     cgc u
||||||||| |||||| ||||||||| ||||     ||| u
cgauuCGAG AGUUUC ACCGACACU Uacg     gcg g
         U      G         A    -----   c 


Annotation confidence Not enough data
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Genome context
chr2R: 6066955-6067030 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from dya-mir-2a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dya-miR-2a

Accession MIMAT0009106
Description Drosophila yakuba dya-miR-2a mature miRNA
Sequence 49 - UAUCACAGCCAGCUUUGAUGAGC - 71
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218