miRBase entry: dya-mir-9b

Stem-loop dya-mir-9b

Accession

MI0009691

Description

Drosophila yakuba dya-mir-9b precursor miRNA

Gene family

MIPF0000014; mir-9

Sequence

ugcauauuauuugcUCUUUGGUGAUUUUAGCUGUAUGguguguuuauguguuccauagagcuuuauuaccaaaaaccaaaugguuucugca
((((.((((((((...(((((((((...((((.(((((..............))))).))))..)))))))))...))))))))...))))

Structure

    --u        cUC         UUU    G     uguguu 
ugca   auuauuug   UUUGGUGAU   AGCU UAUGg      u
||||   ||||||||   |||||||||   |||| |||||       
acgu   ugguaaac   aaaccauua   ucga auacc      a
    cuu        caa         -uu    g     uugugu

Annotation confidence Not enough data

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Genome context

chr2R: 4404240-4404330 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from dya-mir-9b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dya-miR-9b

Accession	MIMAT0009113
Description	Drosophila yakuba dya-miR-9b mature miRNA
Sequence	15 - UCUUUGGUGAUUUUAGCUGUAUG - 37
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218