miRBase entry: bta-mir-216b

Stem-loop bta-mir-216b


Accession
MI0009778
Description
Bos taurus bta-mir-216b precursor miRNA
Gene family
MIPF0000054; mir-216

Literature search
1 open access papers mention bta-mir-216b
(1 sentences)

Sequence

89 reads, 7 reads per million, 29 experiments
gcagacuggaAAAUCUCUGCAGGCAAAUGUGAugucacuaaagaaaucacacacuuacccguagagauucuacagucugaca
.(((((((...(((((((((.((.((.((((((.((......)).))))))...)).)).)))))))))...)))))))...

Structure
--g       gaA         A  C  --A      g  ac 
   cagacug   AAUCUCUGC GG AA   UGUGAu uc  u
   |||||||   ||||||||| || ||   |||||| ||   
   gucugac   uuagagaug cc uu   acacua ag  a
aca       auc         c  a  cac      a  aa 


Annotation confidence Not enough data
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Genome context
chr11: 38669941-38670022 [-]

Database links

Mature bta-miR-216b

Accession MIMAT0009266
Description Bos taurus bta-miR-216b mature miRNA
Sequence 11 - AAAUCUCUGCAGGCAAAUGUGA - 32
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125