miRBase entry: bta-mir-655

Stem-loop bta-mir-655


Accession
MI0009882
Description
Bos taurus bta-mir-655 precursor miRNA
Gene family
MIPF0000018; mir-154


Sequence

734 reads, 15 reads per million, 60 experiments
aacuguucagggauauuugaggagagguuauccguguuauguucgcuuggcucaucaugaAUAAUACAUGGUUAACCUCUCUuugaauaucagacuc
...........(((((((((((((((((((.((((((..((((((..((......))))))))..)))))).)))))))))))))))))))......

Structure
aacuguucagg                   u      ua      cu  gc 
           gauauuugaggagagguua ccgugu  uguucg  ug  u
           ||||||||||||||||||| ||||||  ||||||  ||   
           cuauaaguuUCUCUCCAAU GGUACA  AUAagu  ac  c
-----cucaga                   U      UA      --  ua 


Annotation confidence Not enough data
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Genome context
chr21: 67865688-67865784 [+]
Clustered miRNAs
20 other miRNAs are < 10 kb from bta-mir-655
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-655

Accession MIMAT0009360
Description Bos taurus bta-miR-655 mature miRNA
Sequence 61 - AUAAUACAUGGUUAACCUCUCU - 82
Evidence not_experimental

References

  1. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125