Stem-loop sequence sly-MIR156a

Accession

MI0009971 (change log)

Description

Solanum lycopersicum miR156a stem-loop

Gene family

MIPF0000008; MIR156

Literature search

33 open access papers mention sly-MIR156a
(175 sentences)

Stem-loop

   u         -           u     --   u     aauuuca   a 
5'  ugacagaag auagagagcac aauga  uga augcu       uuc a
    ||||||||| ||||||||||| |||||  ||| |||||       ||| u
3'  acugucuuc uaucucucgug uuacu  acu uacga       ggg u
   u         g           u     ua   c     aaacgac   u 

Confidence

Annotation confidence: not enough data

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Comments

This sequence was named MIR157a in [1].

Genome context

• Coordinates (SL2.50; GCA_000188115.2): chr6: 42851776-42851875 [-]
• Overlapping transcripts:

  intergenic

Database links

• RNAcentral:URS000075A43E_4081
• miRBase Tracker:MI0009971

Mature sequence sly-miR156a

• Accession: MIMAT0009138
• Sequence: 1 - uugacagaagauagagagcac - 21
• Evidence: by similarity; MI0005642

References

1. PMID:18602455 "Identification of conserved microRNAs and their targets from Solanum lycopersicum Mill" Zhang J, Zeng R, Chen J, Liu X, Liao Q Gene. 423:1-7(2008).