Stem-loop sly-MIR162

Accession

MI0009975

Description

Solanum lycopersicum sly-MIR162 precursor miRNA

Literature search

9 open access papers mention sly-MIR162
(18 sentences)

Sequence

caggaggcagcgguaccauugauccguucccuggaagcugaauauauauauacgcaacauuacagcaaaaggaaucggUCGAUAAACCUCUGCAUCCAG
..(((.((((.(((...(((((.(((...(((....(((((((...............))).))))...)))...))))))))..))).)))).)))..

Structure

ca   g    c   acc     u   uuc   ggaa    -   auauau 
  gga gcag ggu   auuga ccg   ccu    gcug aau      a
  ||| |||| |||   ||||| |||   |||    |||| |||      u
  CCU CGUC CCA   UAGCU ggc   gga    cgac uua      a
GA   A    U   -AA     -   uaa   -aaa    a   caacgc 

Annotation confidence Not enough data

Genome context

Unknown

Mature sly-miR162

• Accession: MIMAT0009142
• Description: Solanum lycopersicum sly-miR162 mature miRNA
• Sequence: 79 - UCGAUAAACCUCUGCAUCCAG - 99
• Evidence: not_experimental

References

1. PubMed ID: 18602455
   Identification of conserved microRNAs and their targets from Solanum lycopersicum Mill
   "Zhang J, Zeng R, Chen J, Liu X, Liao Q"
   "Gene (2008) 423:1-7