Stem-loop bmo-mir-92b

Accession

MI0009998

Description

Bombyx mori bmo-mir-92b precursor miRNA

Gene family

MIPF0000013; mir-25

Literature search

5 open access papers mention bmo-mir-92b
(18 sentences)

Sequence

13 reads, 3 reads per million, 3 experiments

gcgguggccacgcuuaggacgcgauuagguguaaacguuuguguuucauaucaAAUUGCACCAAUCCCGGCCUGCcuguggccacagc
((.(((((((((..((((.((.((((.(((((((.....((((...)))).....))))))))))).)).))))..))))))))).))

Structure

  g         cu    a  c    a       acguu    u 
gc guggccacg  uagg cg gauu gguguaa     ugug  
|| |||||||||  |||| || |||| |||||||     |||| u
cg caccggugu  GUCC GC CUAA CCACGUU     auac  
  a         cC    G  C    -       AAacu    u 

Annotation confidence Not enough data

Genome context

NW_004581739.1: 696074-696161 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bmo-mir-92b

Mature bmo-miR-92b

• Accession: MIMAT0009155
• Description: Bombyx mori bmo-miR-92b mature miRNA
• Sequence: 54 - AAUUGCACCAAUCCCGGCCUGC - 75
• Evidence: experimental ; cloned [1], Illumina [2]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148


2. PubMed ID: 18714353
   The silkworm (Bombyx mori) microRNAs and their expressions in multiple developmental stages
   Yu X, Zhou Q, Li SC, Luo Q, Cai Y, Lin WC, Chen H, Yang Y, Hu S, Yu J
   PLoS One (2008) 3:e2997