Stem-loop cfa-mir-18b

Accession

MI0010323

Description

Canis familiaris cfa-mir-18b precursor miRNA

Gene family

MIPF0000001; mir-17

Sequence

ccuguguUAAGGUGCAUCUAGUGCAGUUAgugaagccgcuuagaaccuacugcccuaaaugccccuuccggcacagg
((((((((((((.((((.(((.(((((..((.............))..))))).))).)))).))))..))))))))

Structure

        --    U    C   U     UA  gaagc 
ccuguguU  AAGG GCAU UAG GCAGU  gu     c
||||||||  |||| |||| ||| |||||  ||     g
ggacacgg  uucc cgua auc cguca  ca     c
        cc    c    a   c     uc  agauu 

Annotation confidence Not enough data

Genome context

chrX: 104896339-104896415 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from cfa-mir-18b

Mature cfa-miR-18b

• Accession: MIMAT0009831
• Description: Canis familiaris cfa-miR-18b mature miRNA
• Sequence: 8 - UAAGGUGCAUCUAGUGCAGUUA - 29
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39