miRBase entry: cfa-mir-182

Stem-loop cfa-mir-182


Accession
MI0010336
Description
Canis familiaris cfa-mir-182 precursor miRNA
Gene family
MIPF0000116; mir-182


Sequence

gcuugccucccgccguuUUUGGCAAUGGUAGAACUCACACUggugagguaaugggauccggugguucuagacuugccaacuauggugcgagg
.....((((.((((((..(((((((...((((((...((((((..............))))))))))))...)))))))..)))))).))))

Structure
gcuug    c      uU       UGG      UCA      ugaggu 
     ccuc cgccgu  UUGGCAA   UAGAAC   CACUgg      a
     |||| ||||||  |||||||   ||||||   ||||||       
     ggag guggua  aaccguu   aucuug   guggcc      a
-----    c      uc       cag      ---      uagggu 


Annotation confidence Not enough data
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Genome context
chr14: 7072705-7072796 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from cfa-mir-182
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-182

Accession MIMAT0009841
Description Canis familiaris cfa-miR-182 mature miRNA
Sequence 18 - UUUGGCAAUGGUAGAACUCACACU - 41
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39