Stem-loop cfa-mir-216a

Accession

MI0010344

Description

Canis familiaris cfa-mir-216a precursor miRNA

Gene family

MIPF0000054; mir-216

Sequence

gauggcugugaguuggcuUAAUCUCAGCUGGCAACUGUGagauguucauacaaucccccacaguggucucugggauuaugcuaaacagagcaauauccuugcccu
(((((((.((..(((((.(((((((((..(((.((((((.(((((....)).)))...)))))).))).))))))))).))))).)).)))..))))........

Structure

--------    --   g  ag     u         CU   A      --a   -  u 
        gaug  gcu ug  uuggc UAAUCUCAG  GGC ACUGUG   gau gu c
        ||||  ||| ||  ||||| |||||||||  ||| ||||||   ||| ||  
        cuau  cga ac  aaucg auuaggguc  cug ugacac   cua ca a
ucccguuc    aa   g  -a     u         -u   g      ccc   a  u 

Annotation confidence Not enough data

Genome context

chr10: 56761430-56761534 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-216a

Mature cfa-miR-216a

• Accession: MIMAT0009849
• Description: Canis familiaris cfa-miR-216a mature miRNA
• Sequence: 19 - UAAUCUCAGCUGGCAACUGUG - 39
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39