miRBase entry: cfa-mir-222

Stem-loop cfa-mir-222

Accession

MI0010346

Description

Canis familiaris cfa-mir-222 precursor miRNA

Gene family

MIPF0000051; mir-221

Sequence

cccucaauggcucaguagccaguguagauccugucuuuuguaaucaguAGCUACAUCUGGCUACUGGGUcucugauggcaucuucuagcu
((.(((..(((((((((((((((((((...(((...........)))...))))).))))))))))))))..))).))............

Structure

------------  c   au              -     auc   ucuu 
            cc uca  ggcucaguagccag uguag   cug    u
            || |||  |||||||||||||| |||||   |||    u
            gg agu  cUGGGUCAUCGGUC ACAUC   gac    g
ucgaucuucuac  u   cu              U     GAu   uaau

Annotation confidence Not enough data

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Genome context

chrX: 39524519-39524608 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-222

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-222

Accession	MIMAT0009851
Description	Canis familiaris cfa-miR-222 mature miRNA
Sequence	49 - AGCUACAUCUGGCUACUGGGU - 69
Evidence	not_experimental

References

PubMed ID: 18215311
miRNAminer: a tool for homologous microRNA gene search
"Artzi S, Kiezun A, Shomron N"
"BMC Bioinformatics (2008) 9:39