miRBase entry: cfa-mir-33b

Stem-loop cfa-mir-33b


Accession
MI0010358
Description
Canis familiaris cfa-mir-33b precursor miRNA
Gene family
MIPF0000070; mir-33


Sequence

gcgggcggccccgcgGUGCAUUGCUGUUGCAUUGCacgugagugacgcgggugcagugccucggcagugcagcccggagccggccccuggcacc
(((((((((.(((.((((((((((((..(((((((((.((.......)).)))))))))..)))))))))).))))).))).))))...))...

Structure
---  ---    -   c   c  -          UU         g  ag 
   gc   gggc ggc ccg gG UGCAUUGCUG  GCAUUGCac ug  u
   ||   |||| ||| ||| || ||||||||||  ||||||||| ||  g
   cg   cccg ccg ggc cc acgugacggc  cgugacgug gc  a
cca  guc    g   a   -  g          uc         g  gc 


Annotation confidence Not enough data
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Genome context
chr5: 41685165-41685258 [+]

Database links

Mature cfa-miR-33b

Accession MIMAT0009862
Description Canis familiaris cfa-miR-33b mature miRNA
Sequence 16 - GUGCAUUGCUGUUGCAUUGC - 35
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39