Stem-loop cfa-mir-330

Accession

MI0010392

Description

Canis familiaris cfa-mir-330 precursor miRNA

Gene family

MIPF0000200; mir-330

Sequence

cuuuggcgaucacugccUCUCUGGGCCUGUGUCUUAGGCucugcaagaucaaccgagcaaagcacacggccugcagagaggcagcgcuc
....((((....(((((((((((((((((((.(((..((((.............)))).))))))).))))..))))))))))))))).

Structure

cuuu    auca           --    -    U   AG    ugcaa 
    ggcg    cugccUCUCUG  GGCC UGUG CUU  GCuc     g
    ||||    |||||||||||  |||| |||| |||  ||||     a
    ucgc    gacggagagac  ccgg acac gaa  cgag     u
---c    ----           gu    c    -   -a    ccaac 

Annotation confidence Not enough data

Genome context

chr1: 109922138-109922226 [+]

Mature cfa-miR-330

• Accession: MIMAT0009893
• Description: Canis familiaris cfa-miR-330 mature miRNA
• Sequence: 18 - UCUCUGGGCCUGUGUCUUAGGC - 39
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39